QuBi/modules/ - Revision history

imported>Ppagan at 15:59, 21 February 2013

2013-02-21T15:59:04Z

← Older revision		Revision as of 15:59, 21 February 2013
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	=BIOL 100=		[http://borreliagenome.org/wiki/QuBi Return to QuBi main site]
	=BIOL 102=
	=BIOL 200=		*[http://borreliagenome.org/wiki/QuBi/modules/biol100 BIOL 100]
	=BIOL 202=		*[http://borreliagenome.org/wiki/QuBi/modules/biol102 BIOL 102]
	=BIOL 300=		*[http://borreliagenome.org/wiki/QuBi/modules/biol200 BIOL 200]
			*[http://borreliagenome.org/wiki/QuBi/modules/biol202 BIOL 202]
			*[http://borreliagenome.org/wiki/QuBi/modules/biol300 BIOL 300]
			*[http://borreliagenome.org/wiki/QuBi/modules/biol302 BIOL 302]

imported>Ppagan: Replaced content with "=BIOL 100= =BIOL 102= =BIOL 200= =BIOL 202= =BIOL 300="

2013-02-21T15:42:24Z

Replaced content with "=BIOL 100= =BIOL 102= =BIOL 200= =BIOL 202= =BIOL 300="

← Older revision		Revision as of 15:42, 21 February 2013
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	=BIOL 202=		=BIOL 202=
	=BIOL 300=		=BIOL 300=
	~~=BIOL 302 (Molecular Genetics)=~~

	~~==Identification of mdm2 Splice Variants Using BLAST==~~
	~~===Objectives===~~
	* Learn to use Genbank database and BLAST tool to analyze nucleotide sequences
	* Use BLAST to identify

	~~===Key Concepts===~~
	~~====Blast====~~
	~~====Alternative Splicing====~~


	~~===Exercise===~~

	~~Scenario: You work in a lab, and your research group has isolated four mRNA sequences...~~

	~~{\| class="wikitable"~~
	~~! Genbank Accession # !! cDNA Clone !! Description !! Cell Line !! Length (bp)~~
	\|-
	~~\| AF527840 \|\| \|\| Genomic DNA \|\| \|\| 34,088~~
	\|-
	~~\| EU076746 \|\| P2-MDM2-C1 \|\| cDNA missing exons 5-9 & 11 \|\| MANCA \|\| 427~~
	\|-
	~~\| EU076747 \|\| P2-MDM2-10 \|\| cDNA missing exon 10 \|\| ML-1 \|\| 842~~
	\|-
	~~\| EU076748 \|\| P2-MDM2-C \|\| cDNA missing exons 5-9 \|\| A876 \|\| 505~~
	\|-
	~~\| EU076749 \|\| P2-MDM2-FL \|\| Full-length cDNA \|\| SJSA-1 \|\| 845~~
	\|-
	\|}

	~~[[File:4seq.png]]~~

	~~===Questions===~~

imported>Ppagan: /* Identification of mdm2 Splice Variants Using BLAST */

2013-02-07T19:27:43Z

Identification of mdm2 Splice Variants Using BLAST

← Older revision		Revision as of 19:27, 7 February 2013
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	====Blast====		====Blast====
	====Alternative Splicing====		====Alternative Splicing====


	===Exercise===		===Exercise===

imported>Ppagan: /* Identification of mdm2 Splice Variants Using BLAST */

2013-02-07T19:24:49Z

Identification of mdm2 Splice Variants Using BLAST

← Older revision		Revision as of 19:24, 7 February 2013
Line 7:		Line 7:

	==Identification of mdm2 Splice Variants Using BLAST==		==Identification of mdm2 Splice Variants Using BLAST==
			===Objectives===
			* Learn to use Genbank database and BLAST tool to analyze nucleotide sequences
			* Use BLAST to identify

			===Key Concepts===
			====Blast====
			====Alternative Splicing====

	===~~Learning Objectives~~===		===Exercise===

	~~===Key Concepts===~~		Scenario: You work in a lab, and your research group has isolated four mRNA sequences...

	~~===Exercise===~~
	{\| class="wikitable"		{\| class="wikitable"
	! Genbank Accession # !! cDNA Clone !! Description !! Cell Line !! Length (bp)		! Genbank Accession # !! cDNA Clone !! Description !! Cell Line !! Length (bp)
Line 30:		Line 35:

	[[File:4seq.png]]		[[File:4seq.png]]

			===Questions===

imported>Ppagan: Created page with "=BIOL 100= =BIOL 102= =BIOL 200= =BIOL 202= =BIOL 300= =BIOL 302 (Molecular Genetics)= ==Identification of mdm2 Splice Variants Using BLAST== ===Learning Objectives=== ===..."

2013-02-07T18:57:13Z

Created page with "=BIOL 100= =BIOL 102= =BIOL 200= =BIOL 202= =BIOL 300= =BIOL 302 (Molecular Genetics)= ==Identification of mdm2 Splice Variants Using BLAST== ===Learning Objectives=== ===..."

New page

=BIOL 100=
=BIOL 102=
=BIOL 200=
=BIOL 202=
=BIOL 300=
=BIOL 302 (Molecular Genetics)=

==Identification of mdm2 Splice Variants Using BLAST==

===Learning Objectives===

===Key Concepts===

===Exercise===
{| class="wikitable"
! Genbank Accession # !! cDNA Clone !! Description !! Cell Line !! Length (bp)
|-
| AF527840 || || Genomic DNA || || 34,088
|-
| EU076746 || P2-MDM2-C1 || cDNA missing exons 5-9 & 11 || MANCA || 427
|-
| EU076747 || P2-MDM2-10 || cDNA missing exon 10 || ML-1 || 842
|-
| EU076748 || P2-MDM2-C || cDNA missing exons 5-9 || A876 || 505
|-
| EU076749 || P2-MDM2-FL || Full-length cDNA || SJSA-1 || 845
|-
|}

[[File:4seq.png]]