Latest revision as of 21:08, 31 July 2013

Data

Report for BBA15

Codon Adaptation Index (CAI) for sequence : 0.47

GC percentage for sequence : 33.58%

GENETIC CODE USED : 1 <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi">more about genetic code</a>

CODON USAGE

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

COUNT

1

5

O

7

O

2

O

6

7

11

7

O

1

4

O

4

19

10

4

2

6

O

8

O

5

11

O

9

5

O

3

4

39

2

1

2

O

1

4

10

6

O

1

6

O

13

14

3

O

1

2

3

O

2

11

Relative Synonimous Codon Usage (RSCU)

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

RSCU

0.31

1.54

0.00

2.15

0.00

6.00

0.00

0.92

1.08

1.22

0.78

0.00

2.00

0.00

0.35

1.65

1.82

0.73

0.36

1.09

0.00

1.85

0.00

1.15

2.36

0.00

1.93

1.07

0.00

0.64

0.19

1.81

1.00

0.67

1.33

0.00

4.00

0.89

2.22

1.33

0.00

0.22

1.33

0.00

1.73

1.87

0.40

0.00

1.00

0.80

1.20

0.00

0.33

1.83

Relative Adaptiveness of Codon

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

RAC

0.14

0.71

0.00

1.00

0.00

1.00

0.00

0.86

1.00

0.64

0.00

1.00

0.00

0.21

1.00

0.40

0.20

0.60

0.00

1.00

0.00

0.62

1.00

0.00

0.82

0.45

0.00

0.27

0.10

1.00

0.50

1.00

0.00

1.00

0.40

1.00

0.60

0.00

0.10

0.60

0.00

0.93

1.00

0.21

0.00

1.00

0.67

1.00

0.00

0.18

1.00

Monomers

A	352
T	192
G	154
C	121

<a href="http://search.cpan.org/~shardiwal/Bio-Tools-CodonOptTable-1.05/lib/Bio/Tools/CodonOptTable.pm">Source code</a> is available.

Report for BBA24

Codon Adaptation Index (CAI) for sequence : 0.50

GC percentage for sequence : 32.46%

GENETIC CODE USED : 1 <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi">more about genetic code</a>

CODON USAGE

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

COUNT

1

7

1

7

2

1

O

2

O

4

8

2

7

2

4

O

3

15

5

2

1

O

1

5

O

7

O

5

3

1

3

24

5

6

2

O

3

1

3

5

1

O

1

O

8

1

O

1

2

4

Relative Synonimous Codon Usage (RSCU)

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

RSCU

0.25

1.75

0.25

1.75

2.40

1.20

0.00

2.40

0.00

0.67

1.33

0.44

1.56

1.00

2.00

0.00

0.33

1.67

2.22

0.89

0.44

0.00

2.00

1.25

0.00

1.75

2.47

0.00

1.76

1.06

0.35

0.22

1.78

1.00

1.50

0.50

0.00

3.00

1.00

1.80

3.00

0.60

0.00

0.60

0.00

1.78

0.22

0.00

1.00

0.80

1.60

Relative Adaptiveness of Codon

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

RAC

0.14

1.00

0.14

1.00

0.50

0.00

1.00

0.00

0.50

1.00

0.29

1.00

0.00

0.20

1.00

0.40

0.20

0.00

1.00

0.71

0.00

1.00

0.00

0.71

0.43

0.14

0.13

1.00

0.33

0.00

1.00

0.33

0.60

1.00

0.20

0.00

0.20

0.00

1.00

0.13

0.00

1.00

0.50

1.00

Monomers

A	248
T	139
G	102
C	84

<a href="http://search.cpan.org/~shardiwal/Bio-Tools-CodonOptTable-1.05/lib/Bio/Tools/CodonOptTable.pm">Source code</a> is available.

Report for BBA68

Codon Adaptation Index (CAI) for sequence : 0.48

GC percentage for sequence : 27.62%

GENETIC CODE USED : 1 <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi">more about genetic code</a>

CODON USAGE

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

COUNT

2

6

O

3

O

3

O

4

16

1

12

2

O

13

O

4

21

3

2

1

2

1

12

5

14

7

2

9

5

O

3

4

33

4

7

2

1

O

1

4

1

5

3

O

2

4

O

8

O

4

1

3

6

O

2

1

Relative Synonimous Codon Usage (RSCU)

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

RSCU

0.73

2.18

0.00

1.09

0.00

6.00

0.00

0.40

1.60

0.15

1.85

2.00

0.00

2.00

0.00

0.32

1.68

1.71

1.14

0.57

1.33

0.67

1.16

0.48

1.35

1.62

0.46

2.08

1.15

0.00

0.69

0.22

1.78

1.00

1.56

0.44

0.67

0.00

0.67

2.67

0.40

2.00

1.20

0.00

0.80

1.60

0.00

2.46

0.00

1.23

0.31

1.00

0.67

1.33

0.00

2.67

1.33

Relative Adaptiveness of Codon

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

RAC

0.33

1.00

0.00

0.50

0.00

1.00

0.00

0.25

1.00

0.08

1.00

0.00

1.00

0.00

0.19

1.00

0.67

0.33

1.00

0.50

0.86

0.36

1.00

0.78

0.22

1.00

0.56

0.00

0.33

0.12

1.00

0.29

0.25

0.00

0.25

1.00

0.20

1.00

0.60

0.00

0.40

0.80

0.00

1.00

0.00

0.50

0.13

1.00

0.50

1.00

0.00

1.00

0.50

Monomers

A	346
T	199
G	97
C	111

<a href="http://search.cpan.org/~shardiwal/Bio-Tools-CodonOptTable-1.05/lib/Bio/Tools/CodonOptTable.pm">Source code</a> is available.

Report for BBB18

Codon Adaptation Index (CAI) for sequence : 0.50

GC percentage for sequence : 29.17%

GENETIC CODE USED : 1 <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi">more about genetic code</a>

CODON USAGE

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

COUNT

1

6

O

9

O

2

1

11

1

5

24

7

15

3

4

21

1

3

36

15

5

3

7

1

6

29

7

30

10

O

20

11

2

10

42

9

19

4

O

1

6

11

7

9

4

O

1

20

O

10

9

4

O

3

17

5

1

2

13

14

Relative Synonimous Codon Usage (RSCU)

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

RSCU

0.25

1.50

0.00

2.25

0.00

0.75

0.38

4.13

0.38

0.34

1.66

0.64

1.36

0.86

1.14

1.91

0.09

0.15

1.85

2.00

0.67

0.40

0.93

0.29

1.71

1.32

0.32

1.36

1.13

0.00

2.26

1.25

0.23

1.13

0.38

1.62

1.00

1.65

0.35

0.00

0.22

1.33

2.44

1.02

1.32

0.59

0.00

0.15

2.93

0.00

1.74

1.57

0.70

0.00

1.00

1.55

0.45

0.13

0.27

1.73

1.87

Relative Adaptiveness of Codon

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

RAC

0.11

0.67

0.00

1.00

0.00

0.18

0.09

1.00

0.09

0.21

1.00

0.47

1.00

0.75

1.00

0.05

0.08

1.00

0.33

0.20

0.47

0.17

1.00

0.97

0.23

1.00

0.50

0.00

1.00

0.55

0.10

0.50

0.24

1.00

0.21

0.00

0.09

0.55

1.00

0.35

0.45

0.20

0.00

0.05

1.00

0.00

1.00

0.90

0.40

0.00

1.00

0.29

0.07

0.14

0.93

1.00

Monomers

A	626
T	496
G	248
C	214

<a href="http://search.cpan.org/~shardiwal/Bio-Tools-CodonOptTable-1.05/lib/Bio/Tools/CodonOptTable.pm">Source code</a> is available.

Report for Whole Genome

Codon Adaptation Index (CAI) for sequence : 0.57

GC percentage for sequence : 28.86%

GENETIC CODE USED : 1 <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi">more about genetic code</a>

CODON USAGE

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

COUNT

2000

7080

1187

8110

1277

3427

913

512

11465

584

6857

25195

3762

15623

2397

3330

9874

2224

6834

19297

8360

5151

3452

3285

1808

4294

23760

4165

17140

11759

1426

17941

4742

1385

8043

11148

37595

7794

24077

3813

648

1607

3746

4146

6834

7372

5162

1072

1834

9876

2607

3902

6838

6995

8161

2444

1195

3298

15345

4760

1204

2398

11350

6016

Relative Synonimous Codon Usage (RSCU)

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

RSCU

0.44

1.54

0.26

1.77

0.42

1.13

0.30

0.17

3.78

0.19

0.43

1.57

0.39

1.61

0.84

1.16

1.63

0.37

0.52

1.48

1.65

1.02

0.68

0.65

0.59

1.41

1.58

0.28

1.14

1.56

0.19

2.38

0.63

0.18

1.07

0.46

1.54

1.00

1.73

0.27

0.26

0.63

1.48

1.63

1.28

1.38

0.96

0.20

0.34

1.84

0.59

0.88

1.54

1.49

1.74

0.52

0.25

1.00

1.53

0.47

0.23

0.46

2.17

1.15

Relative Adaptiveness of Codon

CODON

GCC

GCA

GCG

GCT

CGA

AGG

CGT

CGG

AGA

CGC

AAC

AAT

GAC

GAT

TGC

TGT

CAA

CAG

GAG

GAA

GGA

GGT

GGG

GGC

CAC

CAT

ATT

ATC

ATA

CTT

CTG

TTA

CTA

CTC

TTG

AAG

AAA

ATG

TTT

TTC

CCG

CCC

CCA

CCT

AGT

TCA

AGC

TCG

TCC

TCT

TAG

TGA

TAA

ACT

ACA

ACC

ACG

TGG

TAT

TAC

GTC

GTG

GTT

GTA

AMINOACID

Ala

Arg

Asn

Asp

Cys

Gln

Glu

Gly

His

Ile

Leu

Lys

Met

Phe

Pro

Ser

Stop

Thr

Trp

Tyr

Val

RAC

0.25

0.87

0.15

1.00

0.11

0.30

0.08

0.04

1.00

0.05

0.27

1.00

0.24

1.00

0.72

1.00

0.23

0.35

1.00

0.62

0.41

0.39

0.42

1.00

0.18

0.72

0.66

0.08

1.00

0.26

0.08

0.45

0.30

1.00

0.16

0.39

0.90

1.00

0.69

0.75

0.52

0.11

0.19

1.00

0.38

0.57

1.00

0.86

1.00

0.30

0.15

1.00

0.31

0.11

0.21

1.00

0.53

Monomers

A	524241
T	440303
G	225741
C	165502

<a href="http://search.cpan.org/~shardiwal/Bio-Tools-CodonOptTable-1.05/lib/Bio/Tools/CodonOptTable.pm">Source code</a> is available.

Charts

BBA15
BBA24
BBA68
BBB 18
Whole genome

Hypothesis & Background

Central Hypothesis: Borrelia host-interacting genes show optimal codon usage
Background/Rationale:
- Borrelia is an obligate, non-free-living parasite of vertebrates. A large number of genes are devoted to host invasion and to surviving the host immune defense.
- Evolutionary theory predicts that highly expressed genes use the most abundant tRNA in the cell, and, as a result, they tend to show strong codon usage biases
- We expect Borrelia host-interacting, virulence-conferring genes use more optimal codons than housekeeping genes
Importance: If the hypothesis is supported, it would establish a new computational method to identify host-interacting virulence genes based on genome analysis.

Data & Overview

Data Set: The Borrelia burgdorferi B31 genome sequences, N=1500 genes
Identify host-interacting genes and a set of housekeeping genes
Calculate the Codon Usage Adaptation Index for each gene
Test if the biases are significantly different between the virulence genes vs the house keeping genes
Presentation, Report, & Future directions

Essential Computing skills

Operating System: Linux/Ubuntu
Programming Languages: BASH, Perl/BioPerl
Database Language: SQL
Statistical Language: R

Essential Readings

Note: I will post some of the PDFs later
Borrelia burgdorferi & Lyme disease: A Review
Codon Usage Biases: Wikipedia
Borrelia gene regulation: A Review
Identification of Borrelia virulence genes: A genome-wide expression study

Weigang 11:38, 10 May 2013 (EDT)

@@ Line 1: / Line 1: @@
+==Data==
+<h1>Report for BBA15</h1>
+<p><span style="color:red" cite="http://">Codon Adaptation Index (CAI) for sequence</span> : 0.47</p>
+<p><span style="color:red" cite="http://">GC percentage for sequence</span> : 33.58%</p>
+<p><span style="color:red" cite="http://"><span class="caps">GENETIC CODE USED</span></span> : 1 <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi"><small>more about genetic code</small></a></p>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b><span class="caps">CODON USAGE</span></b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">COUNT</span></span></td><td><span style="background:#f4f4f4" cite="http://">1</span></td><td><span style="background:#f4f4f4" cite="http://">5</span></td><td><span style="background:#f4f4f4" cite="http://">O</span></td><td><span style="background:#f4f4f4" cite="http://">7</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">2</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#CC99CC" cite="http://">6</span></td><td><span style="background:#CC99CC" cite="http://">7</span></td><td><span style="background:#99FFCC" cite="http://">11</span></td><td><span style="background:#99FFCC" cite="http://">7</span></td><td><span style="background:#99CC99" cite="http://">O</span></td><td><span style="background:#99CC99" cite="http://">1</span></td><td><span style="background:#CCFF00" cite="http://">4</span></td><td><span style="background:#CCFF00" cite="http://">O</span></td><td><span style="background:#FF00CC" cite="http://">4</span></td><td><span style="background:#FF00CC" cite="http://">19</span></td><td><span style="background:#33FFCC" cite="http://">10</span></td><td><span style="background:#33FFCC" cite="http://">4</span></td><td><span style="background:#33FFCC" cite="http://">2</span></td><td><span style="background:#33FFCC" cite="http://">6</span></td><td><span style="background:#66CCFF" cite="http://">O</span></td><td><span style="background:#66CCFF" cite="http://">O</span></td><td><span style="background:#c9c9c9" cite="http://">8</span></td><td><span style="background:#c9c9c9" cite="http://">O</span></td><td><span style="background:#c9c9c9" cite="http://">5</span></td><td><span style="background:#CCFFFF" cite="http://">11</span></td><td><span style="background:#CCFFFF" cite="http://">O</span></td><td><span style="background:#CCFFFF" cite="http://">9</span></td><td><span style="background:#CCFFFF" cite="http://">5</span></td><td><span style="background:#CCFFFF" cite="http://">O</span></td><td><span style="background:#CCFFFF" cite="http://">3</span></td><td><span style="background:#FFFFCC" cite="http://">4</span></td><td><span style="background:#FFFFCC" cite="http://">39</span></td><td><span style="background:#FFFF66" cite="http://">2</span></td><td><span style="background:#FFCC00" cite="http://">1</span></td><td><span style="background:#FFCC00" cite="http://">2</span></td><td><span style="background:#F4F4F4" cite="http://">O</span></td><td><span style="background:#F4F4F4" cite="http://">O</span></td><td><span style="background:#F4F4F4" cite="http://">O</span></td><td><span style="background:#F4F4F4" cite="http://">1</span></td><td><span style="background:#FF99FF" cite="http://">4</span></td><td><span style="background:#FF99FF" cite="http://">10</span></td><td><span style="background:#FF99FF" cite="http://">6</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">1</span></td><td><span style="background:#FF99FF" cite="http://">6</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#CC99CC" cite="http://">13</span></td><td><span style="background:#CC99CC" cite="http://">14</span></td><td><span style="background:#CC99CC" cite="http://">3</span></td><td><span style="background:#CC99CC" cite="http://">O</span></td><td><span style="background:#99FFCC" cite="http://">1</span></td><td><span style="background:#CCFF00" cite="http://">2</span></td><td><span style="background:#CCFF00" cite="http://">3</span></td><td><span style="background:#33FFCC" cite="http://">O</span></td><td><span style="background:#33FFCC" cite="http://">2</span></td><td><span style="background:#33FFCC" cite="http://">11</span></td><td><span style="background:#33FFCC" cite="http://">11</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Relative Synonimous Codon Usage (RSCU)</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">RSCU</span></span></td><td><span style="background:#f4f4f4" cite="http://">0.31</span></td><td><span style="background:#f4f4f4" cite="http://">1.54</span></td><td><span style="background:#f4f4f4" cite="http://">0.00</span></td><td><span style="background:#f4f4f4" cite="http://">2.15</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">6.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">0.92</span></td><td><span style="background:#CC99CC" cite="http://">1.08</span></td><td><span style="background:#99FFCC" cite="http://">1.22</span></td><td><span style="background:#99FFCC" cite="http://">0.78</span></td><td><span style="background:#99CC99" cite="http://">0.00</span></td><td><span style="background:#99CC99" cite="http://">2.00</span></td><td><span style="background:#CCFF00" cite="http://">2.00</span></td><td><span style="background:#CCFF00" cite="http://">0.00</span></td><td><span style="background:#FF00CC" cite="http://">0.35</span></td><td><span style="background:#FF00CC" cite="http://">1.65</span></td><td><span style="background:#33FFCC" cite="http://">1.82</span></td><td><span style="background:#33FFCC" cite="http://">0.73</span></td><td><span style="background:#33FFCC" cite="http://">0.36</span></td><td><span style="background:#33FFCC" cite="http://">1.09</span></td><td><span style="background:#66CCFF" cite="http://">0.00</span></td><td><span style="background:#66CCFF" cite="http://">0.00</span></td><td><span style="background:#c9c9c9" cite="http://">1.85</span></td><td><span style="background:#c9c9c9" cite="http://">0.00</span></td><td><span style="background:#c9c9c9" cite="http://">1.15</span></td><td><span style="background:#CCFFFF" cite="http://">2.36</span></td><td><span style="background:#CCFFFF" cite="http://">0.00</span></td><td><span style="background:#CCFFFF" cite="http://">1.93</span></td><td><span style="background:#CCFFFF" cite="http://">1.07</span></td><td><span style="background:#CCFFFF" cite="http://">0.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.64</span></td><td><span style="background:#FFFFCC" cite="http://">0.19</span></td><td><span style="background:#FFFFCC" cite="http://">1.81</span></td><td><span style="background:#FFFF66" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">0.67</span></td><td><span style="background:#FFCC00" cite="http://">1.33</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">4.00</span></td><td><span style="background:#FF99FF" cite="http://">0.89</span></td><td><span style="background:#FF99FF" cite="http://">2.22</span></td><td><span style="background:#FF99FF" cite="http://">1.33</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.22</span></td><td><span style="background:#FF99FF" cite="http://">1.33</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">1.73</span></td><td><span style="background:#CC99CC" cite="http://">1.87</span></td><td><span style="background:#CC99CC" cite="http://">0.40</span></td><td><span style="background:#CC99CC" cite="http://">0.00</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.80</span></td><td><span style="background:#CCFF00" cite="http://">1.20</span></td><td><span style="background:#33FFCC" cite="http://">0.00</span></td><td><span style="background:#33FFCC" cite="http://">0.33</span></td><td><span style="background:#33FFCC" cite="http://">1.83</span></td><td><span style="background:#33FFCC" cite="http://">1.83</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Relative Adaptiveness of Codon</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">RAC</span></span></td><td><span style="background:#f4f4f4" cite="http://">0.14</span></td><td><span style="background:#f4f4f4" cite="http://">0.71</span></td><td><span style="background:#f4f4f4" cite="http://">0.00</span></td><td><span style="background:#f4f4f4" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">0.86</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#99FFCC" cite="http://">0.64</span></td><td><span style="background:#99CC99" cite="http://">0.00</span></td><td><span style="background:#99CC99" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.00</span></td><td><span style="background:#FF00CC" cite="http://">0.21</span></td><td><span style="background:#FF00CC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.40</span></td><td><span style="background:#33FFCC" cite="http://">0.20</span></td><td><span style="background:#33FFCC" cite="http://">0.60</span></td><td><span style="background:#66CCFF" cite="http://">0.00</span></td><td><span style="background:#66CCFF" cite="http://">0.00</span></td><td><span style="background:#c9c9c9" cite="http://">1.00</span></td><td><span style="background:#c9c9c9" cite="http://">0.00</span></td><td><span style="background:#c9c9c9" cite="http://">0.62</span></td><td><span style="background:#CCFFFF" cite="http://">1.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.82</span></td><td><span style="background:#CCFFFF" cite="http://">0.45</span></td><td><span style="background:#CCFFFF" cite="http://">0.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.27</span></td><td><span style="background:#FFFFCC" cite="http://">0.10</span></td><td><span style="background:#FFFFCC" cite="http://">1.00</span></td><td><span style="background:#FFFF66" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">0.50</span></td><td><span style="background:#FFCC00" cite="http://">1.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.40</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.60</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.10</span></td><td><span style="background:#FF99FF" cite="http://">0.60</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">0.93</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#CC99CC" cite="http://">0.21</span></td><td><span style="background:#CC99CC" cite="http://">0.00</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.67</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.00</span></td><td><span style="background:#33FFCC" cite="http://">0.18</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Monomers</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://">A</span></td><td>352</td></tr><tr><td><span style="color:red" cite="http://">T</span></td><td>192</td></tr><tr><td><span style="color:red" cite="http://">G</span></td><td>154</td></tr><tr><td><span style="color:red" cite="http://">C</span></td><td>121</td></tr></table>
+<p><a href="http://search.cpan.org/~shardiwal/Bio-Tools-CodonOptTable-1.05/lib/Bio/Tools/CodonOptTable.pm">Source code</a> is available.</p><h1>Report for BBA24</h1>
+<p><span style="color:red" cite="http://">Codon Adaptation Index (CAI) for sequence</span> : 0.50</p>
+<p><span style="color:red" cite="http://">GC percentage for sequence</span> : 32.46%</p>
+<p><span style="color:red" cite="http://"><span class="caps">GENETIC CODE USED</span></span> : 1 <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi"><small>more about genetic code</small></a></p>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b><span class="caps">CODON USAGE</span></b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">COUNT</span></span></td><td><span style="background:#f4f4f4" cite="http://">1</span></td><td><span style="background:#f4f4f4" cite="http://">7</span></td><td><span style="background:#f4f4f4" cite="http://">1</span></td><td><span style="background:#f4f4f4" cite="http://">7</span></td><td><span style="background:#FF99FF" cite="http://">2</span></td><td><span style="background:#FF99FF" cite="http://">1</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">2</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#CC99CC" cite="http://">4</span></td><td><span style="background:#CC99CC" cite="http://">8</span></td><td><span style="background:#99FFCC" cite="http://">2</span></td><td><span style="background:#99FFCC" cite="http://">7</span></td><td><span style="background:#99CC99" cite="http://">2</span></td><td><span style="background:#99CC99" cite="http://">2</span></td><td><span style="background:#CCFF00" cite="http://">4</span></td><td><span style="background:#CCFF00" cite="http://">O</span></td><td><span style="background:#FF00CC" cite="http://">3</span></td><td><span style="background:#FF00CC" cite="http://">15</span></td><td><span style="background:#33FFCC" cite="http://">5</span></td><td><span style="background:#33FFCC" cite="http://">2</span></td><td><span style="background:#33FFCC" cite="http://">1</span></td><td><span style="background:#33FFCC" cite="http://">1</span></td><td><span style="background:#66CCFF" cite="http://">O</span></td><td><span style="background:#66CCFF" cite="http://">1</span></td><td><span style="background:#c9c9c9" cite="http://">5</span></td><td><span style="background:#c9c9c9" cite="http://">O</span></td><td><span style="background:#c9c9c9" cite="http://">7</span></td><td><span style="background:#CCFFFF" cite="http://">7</span></td><td><span style="background:#CCFFFF" cite="http://">O</span></td><td><span style="background:#CCFFFF" cite="http://">5</span></td><td><span style="background:#CCFFFF" cite="http://">3</span></td><td><span style="background:#CCFFFF" cite="http://">1</span></td><td><span style="background:#CCFFFF" cite="http://">1</span></td><td><span style="background:#FFFFCC" cite="http://">3</span></td><td><span style="background:#FFFFCC" cite="http://">24</span></td><td><span style="background:#FFFF66" cite="http://">5</span></td><td><span style="background:#FFCC00" cite="http://">6</span></td><td><span style="background:#FFCC00" cite="http://">2</span></td><td><span style="background:#F4F4F4" cite="http://">O</span></td><td><span style="background:#F4F4F4" cite="http://">O</span></td><td><span style="background:#F4F4F4" cite="http://">3</span></td><td><span style="background:#F4F4F4" cite="http://">1</span></td><td><span style="background:#FF99FF" cite="http://">3</span></td><td><span style="background:#FF99FF" cite="http://">5</span></td><td><span style="background:#FF99FF" cite="http://">1</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">1</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#CC99CC" cite="http://">8</span></td><td><span style="background:#CC99CC" cite="http://">8</span></td><td><span style="background:#CC99CC" cite="http://">1</span></td><td><span style="background:#CC99CC" cite="http://">1</span></td><td><span style="background:#99FFCC" cite="http://">O</span></td><td><span style="background:#CCFF00" cite="http://">1</span></td><td><span style="background:#CCFF00" cite="http://">1</span></td><td><span style="background:#33FFCC" cite="http://">2</span></td><td><span style="background:#33FFCC" cite="http://">2</span></td><td><span style="background:#33FFCC" cite="http://">2</span></td><td><span style="background:#33FFCC" cite="http://">4</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Relative Synonimous Codon Usage (RSCU)</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">RSCU</span></span></td><td><span style="background:#f4f4f4" cite="http://">0.25</span></td><td><span style="background:#f4f4f4" cite="http://">1.75</span></td><td><span style="background:#f4f4f4" cite="http://">0.25</span></td><td><span style="background:#f4f4f4" cite="http://">1.75</span></td><td><span style="background:#FF99FF" cite="http://">2.40</span></td><td><span style="background:#FF99FF" cite="http://">1.20</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">2.40</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">0.67</span></td><td><span style="background:#CC99CC" cite="http://">1.33</span></td><td><span style="background:#99FFCC" cite="http://">0.44</span></td><td><span style="background:#99FFCC" cite="http://">1.56</span></td><td><span style="background:#99CC99" cite="http://">1.00</span></td><td><span style="background:#99CC99" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">2.00</span></td><td><span style="background:#CCFF00" cite="http://">0.00</span></td><td><span style="background:#FF00CC" cite="http://">0.33</span></td><td><span style="background:#FF00CC" cite="http://">1.67</span></td><td><span style="background:#33FFCC" cite="http://">2.22</span></td><td><span style="background:#33FFCC" cite="http://">0.89</span></td><td><span style="background:#33FFCC" cite="http://">0.44</span></td><td><span style="background:#33FFCC" cite="http://">0.44</span></td><td><span style="background:#66CCFF" cite="http://">0.00</span></td><td><span style="background:#66CCFF" cite="http://">2.00</span></td><td><span style="background:#c9c9c9" cite="http://">1.25</span></td><td><span style="background:#c9c9c9" cite="http://">0.00</span></td><td><span style="background:#c9c9c9" cite="http://">1.75</span></td><td><span style="background:#CCFFFF" cite="http://">2.47</span></td><td><span style="background:#CCFFFF" cite="http://">0.00</span></td><td><span style="background:#CCFFFF" cite="http://">1.76</span></td><td><span style="background:#CCFFFF" cite="http://">1.06</span></td><td><span style="background:#CCFFFF" cite="http://">0.35</span></td><td><span style="background:#CCFFFF" cite="http://">0.35</span></td><td><span style="background:#FFFFCC" cite="http://">0.22</span></td><td><span style="background:#FFFFCC" cite="http://">1.78</span></td><td><span style="background:#FFFF66" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">1.50</span></td><td><span style="background:#FFCC00" cite="http://">0.50</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">3.00</span></td><td><span style="background:#F4F4F4" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">1.80</span></td><td><span style="background:#FF99FF" cite="http://">3.00</span></td><td><span style="background:#FF99FF" cite="http://">0.60</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.60</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">1.78</span></td><td><span style="background:#CC99CC" cite="http://">1.78</span></td><td><span style="background:#CC99CC" cite="http://">0.22</span></td><td><span style="background:#CC99CC" cite="http://">0.22</span></td><td><span style="background:#99FFCC" cite="http://">0.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.80</span></td><td><span style="background:#33FFCC" cite="http://">0.80</span></td><td><span style="background:#33FFCC" cite="http://">0.80</span></td><td><span style="background:#33FFCC" cite="http://">1.60</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Relative Adaptiveness of Codon</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">RAC</span></span></td><td><span style="background:#f4f4f4" cite="http://">0.14</span></td><td><span style="background:#f4f4f4" cite="http://">1.00</span></td><td><span style="background:#f4f4f4" cite="http://">0.14</span></td><td><span style="background:#f4f4f4" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.50</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">0.50</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#99FFCC" cite="http://">0.29</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#99CC99" cite="http://">1.00</span></td><td><span style="background:#99CC99" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.00</span></td><td><span style="background:#FF00CC" cite="http://">0.20</span></td><td><span style="background:#FF00CC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.40</span></td><td><span style="background:#33FFCC" cite="http://">0.20</span></td><td><span style="background:#33FFCC" cite="http://">0.20</span></td><td><span style="background:#66CCFF" cite="http://">0.00</span></td><td><span style="background:#66CCFF" cite="http://">1.00</span></td><td><span style="background:#c9c9c9" cite="http://">0.71</span></td><td><span style="background:#c9c9c9" cite="http://">0.00</span></td><td><span style="background:#c9c9c9" cite="http://">1.00</span></td><td><span style="background:#CCFFFF" cite="http://">1.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.71</span></td><td><span style="background:#CCFFFF" cite="http://">0.43</span></td><td><span style="background:#CCFFFF" cite="http://">0.14</span></td><td><span style="background:#CCFFFF" cite="http://">0.14</span></td><td><span style="background:#FFFFCC" cite="http://">0.13</span></td><td><span style="background:#FFFFCC" cite="http://">1.00</span></td><td><span style="background:#FFFF66" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">0.33</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">1.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.33</span></td><td><span style="background:#FF99FF" cite="http://">0.60</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.20</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.20</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#CC99CC" cite="http://">0.13</span></td><td><span style="background:#CC99CC" cite="http://">0.13</span></td><td><span style="background:#99FFCC" cite="http://">0.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.50</span></td><td><span style="background:#33FFCC" cite="http://">0.50</span></td><td><span style="background:#33FFCC" cite="http://">0.50</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Monomers</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://">A</span></td><td>248</td></tr><tr><td><span style="color:red" cite="http://">T</span></td><td>139</td></tr><tr><td><span style="color:red" cite="http://">G</span></td><td>102</td></tr><tr><td><span style="color:red" cite="http://">C</span></td><td>84</td></tr></table>
+<p><a href="http://search.cpan.org/~shardiwal/Bio-Tools-CodonOptTable-1.05/lib/Bio/Tools/CodonOptTable.pm">Source code</a> is available.</p><h1>Report for BBA68</h1>
+<p><span style="color:red" cite="http://">Codon Adaptation Index (CAI) for sequence</span> : 0.48</p>
+<p><span style="color:red" cite="http://">GC percentage for sequence</span> : 27.62%</p>
+<p><span style="color:red" cite="http://"><span class="caps">GENETIC CODE USED</span></span> : 1 <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi"><small>more about genetic code</small></a></p>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b><span class="caps">CODON USAGE</span></b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">COUNT</span></span></td><td><span style="background:#f4f4f4" cite="http://">2</span></td><td><span style="background:#f4f4f4" cite="http://">6</span></td><td><span style="background:#f4f4f4" cite="http://">O</span></td><td><span style="background:#f4f4f4" cite="http://">3</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">3</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#CC99CC" cite="http://">4</span></td><td><span style="background:#CC99CC" cite="http://">16</span></td><td><span style="background:#99FFCC" cite="http://">1</span></td><td><span style="background:#99FFCC" cite="http://">12</span></td><td><span style="background:#99CC99" cite="http://">2</span></td><td><span style="background:#99CC99" cite="http://">O</span></td><td><span style="background:#CCFF00" cite="http://">13</span></td><td><span style="background:#CCFF00" cite="http://">O</span></td><td><span style="background:#FF00CC" cite="http://">4</span></td><td><span style="background:#FF00CC" cite="http://">21</span></td><td><span style="background:#33FFCC" cite="http://">3</span></td><td><span style="background:#33FFCC" cite="http://">2</span></td><td><span style="background:#33FFCC" cite="http://">1</span></td><td><span style="background:#33FFCC" cite="http://">1</span></td><td><span style="background:#66CCFF" cite="http://">2</span></td><td><span style="background:#66CCFF" cite="http://">1</span></td><td><span style="background:#c9c9c9" cite="http://">12</span></td><td><span style="background:#c9c9c9" cite="http://">5</span></td><td><span style="background:#c9c9c9" cite="http://">14</span></td><td><span style="background:#CCFFFF" cite="http://">7</span></td><td><span style="background:#CCFFFF" cite="http://">2</span></td><td><span style="background:#CCFFFF" cite="http://">9</span></td><td><span style="background:#CCFFFF" cite="http://">5</span></td><td><span style="background:#CCFFFF" cite="http://">O</span></td><td><span style="background:#CCFFFF" cite="http://">3</span></td><td><span style="background:#FFFFCC" cite="http://">4</span></td><td><span style="background:#FFFFCC" cite="http://">33</span></td><td><span style="background:#FFFF66" cite="http://">4</span></td><td><span style="background:#FFCC00" cite="http://">7</span></td><td><span style="background:#FFCC00" cite="http://">2</span></td><td><span style="background:#F4F4F4" cite="http://">1</span></td><td><span style="background:#F4F4F4" cite="http://">O</span></td><td><span style="background:#F4F4F4" cite="http://">1</span></td><td><span style="background:#F4F4F4" cite="http://">4</span></td><td><span style="background:#FF99FF" cite="http://">1</span></td><td><span style="background:#FF99FF" cite="http://">5</span></td><td><span style="background:#FF99FF" cite="http://">3</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">2</span></td><td><span style="background:#FF99FF" cite="http://">4</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#CC99CC" cite="http://">8</span></td><td><span style="background:#CC99CC" cite="http://">O</span></td><td><span style="background:#CC99CC" cite="http://">4</span></td><td><span style="background:#CC99CC" cite="http://">1</span></td><td><span style="background:#99FFCC" cite="http://">1</span></td><td><span style="background:#CCFF00" cite="http://">3</span></td><td><span style="background:#CCFF00" cite="http://">6</span></td><td><span style="background:#33FFCC" cite="http://">O</span></td><td><span style="background:#33FFCC" cite="http://">O</span></td><td><span style="background:#33FFCC" cite="http://">2</span></td><td><span style="background:#33FFCC" cite="http://">1</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Relative Synonimous Codon Usage (RSCU)</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">RSCU</span></span></td><td><span style="background:#f4f4f4" cite="http://">0.73</span></td><td><span style="background:#f4f4f4" cite="http://">2.18</span></td><td><span style="background:#f4f4f4" cite="http://">0.00</span></td><td><span style="background:#f4f4f4" cite="http://">1.09</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">6.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">0.40</span></td><td><span style="background:#CC99CC" cite="http://">1.60</span></td><td><span style="background:#99FFCC" cite="http://">0.15</span></td><td><span style="background:#99FFCC" cite="http://">1.85</span></td><td><span style="background:#99CC99" cite="http://">2.00</span></td><td><span style="background:#99CC99" cite="http://">0.00</span></td><td><span style="background:#CCFF00" cite="http://">2.00</span></td><td><span style="background:#CCFF00" cite="http://">0.00</span></td><td><span style="background:#FF00CC" cite="http://">0.32</span></td><td><span style="background:#FF00CC" cite="http://">1.68</span></td><td><span style="background:#33FFCC" cite="http://">1.71</span></td><td><span style="background:#33FFCC" cite="http://">1.14</span></td><td><span style="background:#33FFCC" cite="http://">0.57</span></td><td><span style="background:#33FFCC" cite="http://">0.57</span></td><td><span style="background:#66CCFF" cite="http://">1.33</span></td><td><span style="background:#66CCFF" cite="http://">0.67</span></td><td><span style="background:#c9c9c9" cite="http://">1.16</span></td><td><span style="background:#c9c9c9" cite="http://">0.48</span></td><td><span style="background:#c9c9c9" cite="http://">1.35</span></td><td><span style="background:#CCFFFF" cite="http://">1.62</span></td><td><span style="background:#CCFFFF" cite="http://">0.46</span></td><td><span style="background:#CCFFFF" cite="http://">2.08</span></td><td><span style="background:#CCFFFF" cite="http://">1.15</span></td><td><span style="background:#CCFFFF" cite="http://">0.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.69</span></td><td><span style="background:#FFFFCC" cite="http://">0.22</span></td><td><span style="background:#FFFFCC" cite="http://">1.78</span></td><td><span style="background:#FFFF66" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">1.56</span></td><td><span style="background:#FFCC00" cite="http://">0.44</span></td><td><span style="background:#F4F4F4" cite="http://">0.67</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.67</span></td><td><span style="background:#F4F4F4" cite="http://">2.67</span></td><td><span style="background:#FF99FF" cite="http://">0.40</span></td><td><span style="background:#FF99FF" cite="http://">2.00</span></td><td><span style="background:#FF99FF" cite="http://">1.20</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.80</span></td><td><span style="background:#FF99FF" cite="http://">1.60</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">2.46</span></td><td><span style="background:#CC99CC" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">1.23</span></td><td><span style="background:#CC99CC" cite="http://">0.31</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.67</span></td><td><span style="background:#CCFF00" cite="http://">1.33</span></td><td><span style="background:#33FFCC" cite="http://">0.00</span></td><td><span style="background:#33FFCC" cite="http://">0.00</span></td><td><span style="background:#33FFCC" cite="http://">2.67</span></td><td><span style="background:#33FFCC" cite="http://">1.33</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Relative Adaptiveness of Codon</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">RAC</span></span></td><td><span style="background:#f4f4f4" cite="http://">0.33</span></td><td><span style="background:#f4f4f4" cite="http://">1.00</span></td><td><span style="background:#f4f4f4" cite="http://">0.00</span></td><td><span style="background:#f4f4f4" cite="http://">0.50</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">0.25</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#99FFCC" cite="http://">0.08</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#99CC99" cite="http://">1.00</span></td><td><span style="background:#99CC99" cite="http://">0.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.00</span></td><td><span style="background:#FF00CC" cite="http://">0.19</span></td><td><span style="background:#FF00CC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.67</span></td><td><span style="background:#33FFCC" cite="http://">0.33</span></td><td><span style="background:#33FFCC" cite="http://">0.33</span></td><td><span style="background:#66CCFF" cite="http://">1.00</span></td><td><span style="background:#66CCFF" cite="http://">0.50</span></td><td><span style="background:#c9c9c9" cite="http://">0.86</span></td><td><span style="background:#c9c9c9" cite="http://">0.36</span></td><td><span style="background:#c9c9c9" cite="http://">1.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.78</span></td><td><span style="background:#CCFFFF" cite="http://">0.22</span></td><td><span style="background:#CCFFFF" cite="http://">1.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.56</span></td><td><span style="background:#CCFFFF" cite="http://">0.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.33</span></td><td><span style="background:#FFFFCC" cite="http://">0.12</span></td><td><span style="background:#FFFFCC" cite="http://">1.00</span></td><td><span style="background:#FFFF66" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">0.29</span></td><td><span style="background:#F4F4F4" cite="http://">0.25</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.25</span></td><td><span style="background:#F4F4F4" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.20</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.60</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.40</span></td><td><span style="background:#FF99FF" cite="http://">0.80</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#CC99CC" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">0.50</span></td><td><span style="background:#CC99CC" cite="http://">0.13</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.50</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.00</span></td><td><span style="background:#33FFCC" cite="http://">0.00</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.50</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Monomers</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://">A</span></td><td>346</td></tr><tr><td><span style="color:red" cite="http://">T</span></td><td>199</td></tr><tr><td><span style="color:red" cite="http://">G</span></td><td>97</td></tr><tr><td><span style="color:red" cite="http://">C</span></td><td>111</td></tr></table>
+<p><a href="http://search.cpan.org/~shardiwal/Bio-Tools-CodonOptTable-1.05/lib/Bio/Tools/CodonOptTable.pm">Source code</a> is available.</p><h1>Report for BBB18</h1>
+<p><span style="color:red" cite="http://">Codon Adaptation Index (CAI) for sequence</span> : 0.50</p>
+<p><span style="color:red" cite="http://">GC percentage for sequence</span> : 29.17%</p>
+<p><span style="color:red" cite="http://"><span class="caps">GENETIC CODE USED</span></span> : 1 <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi"><small>more about genetic code</small></a></p>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b><span class="caps">CODON USAGE</span></b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">COUNT</span></span></td><td><span style="background:#f4f4f4" cite="http://">1</span></td><td><span style="background:#f4f4f4" cite="http://">6</span></td><td><span style="background:#f4f4f4" cite="http://">O</span></td><td><span style="background:#f4f4f4" cite="http://">9</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">2</span></td><td><span style="background:#FF99FF" cite="http://">1</span></td><td><span style="background:#FF99FF" cite="http://">1</span></td><td><span style="background:#FF99FF" cite="http://">11</span></td><td><span style="background:#FF99FF" cite="http://">1</span></td><td><span style="background:#CC99CC" cite="http://">5</span></td><td><span style="background:#CC99CC" cite="http://">24</span></td><td><span style="background:#99FFCC" cite="http://">7</span></td><td><span style="background:#99FFCC" cite="http://">15</span></td><td><span style="background:#99CC99" cite="http://">3</span></td><td><span style="background:#99CC99" cite="http://">4</span></td><td><span style="background:#CCFF00" cite="http://">21</span></td><td><span style="background:#CCFF00" cite="http://">1</span></td><td><span style="background:#FF00CC" cite="http://">3</span></td><td><span style="background:#FF00CC" cite="http://">36</span></td><td><span style="background:#33FFCC" cite="http://">15</span></td><td><span style="background:#33FFCC" cite="http://">5</span></td><td><span style="background:#33FFCC" cite="http://">3</span></td><td><span style="background:#33FFCC" cite="http://">7</span></td><td><span style="background:#66CCFF" cite="http://">1</span></td><td><span style="background:#66CCFF" cite="http://">6</span></td><td><span style="background:#c9c9c9" cite="http://">29</span></td><td><span style="background:#c9c9c9" cite="http://">7</span></td><td><span style="background:#c9c9c9" cite="http://">30</span></td><td><span style="background:#CCFFFF" cite="http://">10</span></td><td><span style="background:#CCFFFF" cite="http://">O</span></td><td><span style="background:#CCFFFF" cite="http://">20</span></td><td><span style="background:#CCFFFF" cite="http://">11</span></td><td><span style="background:#CCFFFF" cite="http://">2</span></td><td><span style="background:#CCFFFF" cite="http://">10</span></td><td><span style="background:#FFFFCC" cite="http://">10</span></td><td><span style="background:#FFFFCC" cite="http://">42</span></td><td><span style="background:#FFFF66" cite="http://">9</span></td><td><span style="background:#FFCC00" cite="http://">19</span></td><td><span style="background:#FFCC00" cite="http://">4</span></td><td><span style="background:#F4F4F4" cite="http://">O</span></td><td><span style="background:#F4F4F4" cite="http://">1</span></td><td><span style="background:#F4F4F4" cite="http://">6</span></td><td><span style="background:#F4F4F4" cite="http://">11</span></td><td><span style="background:#FF99FF" cite="http://">7</span></td><td><span style="background:#FF99FF" cite="http://">9</span></td><td><span style="background:#FF99FF" cite="http://">4</span></td><td><span style="background:#FF99FF" cite="http://">O</span></td><td><span style="background:#FF99FF" cite="http://">1</span></td><td><span style="background:#FF99FF" cite="http://">20</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#f8f8f8" cite="http://">O</span></td><td><span style="background:#CC99CC" cite="http://">10</span></td><td><span style="background:#CC99CC" cite="http://">9</span></td><td><span style="background:#CC99CC" cite="http://">4</span></td><td><span style="background:#CC99CC" cite="http://">O</span></td><td><span style="background:#99FFCC" cite="http://">3</span></td><td><span style="background:#CCFF00" cite="http://">17</span></td><td><span style="background:#CCFF00" cite="http://">5</span></td><td><span style="background:#33FFCC" cite="http://">1</span></td><td><span style="background:#33FFCC" cite="http://">2</span></td><td><span style="background:#33FFCC" cite="http://">13</span></td><td><span style="background:#33FFCC" cite="http://">14</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Relative Synonimous Codon Usage (RSCU)</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">RSCU</span></span></td><td><span style="background:#f4f4f4" cite="http://">0.25</span></td><td><span style="background:#f4f4f4" cite="http://">1.50</span></td><td><span style="background:#f4f4f4" cite="http://">0.00</span></td><td><span style="background:#f4f4f4" cite="http://">2.25</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.75</span></td><td><span style="background:#FF99FF" cite="http://">0.38</span></td><td><span style="background:#FF99FF" cite="http://">0.38</span></td><td><span style="background:#FF99FF" cite="http://">4.13</span></td><td><span style="background:#FF99FF" cite="http://">0.38</span></td><td><span style="background:#CC99CC" cite="http://">0.34</span></td><td><span style="background:#CC99CC" cite="http://">1.66</span></td><td><span style="background:#99FFCC" cite="http://">0.64</span></td><td><span style="background:#99FFCC" cite="http://">1.36</span></td><td><span style="background:#99CC99" cite="http://">0.86</span></td><td><span style="background:#99CC99" cite="http://">1.14</span></td><td><span style="background:#CCFF00" cite="http://">1.91</span></td><td><span style="background:#CCFF00" cite="http://">0.09</span></td><td><span style="background:#FF00CC" cite="http://">0.15</span></td><td><span style="background:#FF00CC" cite="http://">1.85</span></td><td><span style="background:#33FFCC" cite="http://">2.00</span></td><td><span style="background:#33FFCC" cite="http://">0.67</span></td><td><span style="background:#33FFCC" cite="http://">0.40</span></td><td><span style="background:#33FFCC" cite="http://">0.93</span></td><td><span style="background:#66CCFF" cite="http://">0.29</span></td><td><span style="background:#66CCFF" cite="http://">1.71</span></td><td><span style="background:#c9c9c9" cite="http://">1.32</span></td><td><span style="background:#c9c9c9" cite="http://">0.32</span></td><td><span style="background:#c9c9c9" cite="http://">1.36</span></td><td><span style="background:#CCFFFF" cite="http://">1.13</span></td><td><span style="background:#CCFFFF" cite="http://">0.00</span></td><td><span style="background:#CCFFFF" cite="http://">2.26</span></td><td><span style="background:#CCFFFF" cite="http://">1.25</span></td><td><span style="background:#CCFFFF" cite="http://">0.23</span></td><td><span style="background:#CCFFFF" cite="http://">1.13</span></td><td><span style="background:#FFFFCC" cite="http://">0.38</span></td><td><span style="background:#FFFFCC" cite="http://">1.62</span></td><td><span style="background:#FFFF66" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">1.65</span></td><td><span style="background:#FFCC00" cite="http://">0.35</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.22</span></td><td><span style="background:#F4F4F4" cite="http://">1.33</span></td><td><span style="background:#F4F4F4" cite="http://">2.44</span></td><td><span style="background:#FF99FF" cite="http://">1.02</span></td><td><span style="background:#FF99FF" cite="http://">1.32</span></td><td><span style="background:#FF99FF" cite="http://">0.59</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.15</span></td><td><span style="background:#FF99FF" cite="http://">2.93</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">1.74</span></td><td><span style="background:#CC99CC" cite="http://">1.57</span></td><td><span style="background:#CC99CC" cite="http://">0.70</span></td><td><span style="background:#CC99CC" cite="http://">0.00</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">1.55</span></td><td><span style="background:#CCFF00" cite="http://">0.45</span></td><td><span style="background:#33FFCC" cite="http://">0.13</span></td><td><span style="background:#33FFCC" cite="http://">0.27</span></td><td><span style="background:#33FFCC" cite="http://">1.73</span></td><td><span style="background:#33FFCC" cite="http://">1.87</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Relative Adaptiveness of Codon</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">RAC</span></span></td><td><span style="background:#f4f4f4" cite="http://">0.11</span></td><td><span style="background:#f4f4f4" cite="http://">0.67</span></td><td><span style="background:#f4f4f4" cite="http://">0.00</span></td><td><span style="background:#f4f4f4" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.18</span></td><td><span style="background:#FF99FF" cite="http://">0.09</span></td><td><span style="background:#FF99FF" cite="http://">0.09</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.09</span></td><td><span style="background:#CC99CC" cite="http://">0.21</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#99FFCC" cite="http://">0.47</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#99CC99" cite="http://">0.75</span></td><td><span style="background:#99CC99" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.05</span></td><td><span style="background:#FF00CC" cite="http://">0.08</span></td><td><span style="background:#FF00CC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.33</span></td><td><span style="background:#33FFCC" cite="http://">0.20</span></td><td><span style="background:#33FFCC" cite="http://">0.47</span></td><td><span style="background:#66CCFF" cite="http://">0.17</span></td><td><span style="background:#66CCFF" cite="http://">1.00</span></td><td><span style="background:#c9c9c9" cite="http://">0.97</span></td><td><span style="background:#c9c9c9" cite="http://">0.23</span></td><td><span style="background:#c9c9c9" cite="http://">1.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.50</span></td><td><span style="background:#CCFFFF" cite="http://">0.00</span></td><td><span style="background:#CCFFFF" cite="http://">1.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.55</span></td><td><span style="background:#CCFFFF" cite="http://">0.10</span></td><td><span style="background:#CCFFFF" cite="http://">0.50</span></td><td><span style="background:#FFFFCC" cite="http://">0.24</span></td><td><span style="background:#FFFFCC" cite="http://">1.00</span></td><td><span style="background:#FFFF66" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">0.21</span></td><td><span style="background:#F4F4F4" cite="http://">0.00</span></td><td><span style="background:#F4F4F4" cite="http://">0.09</span></td><td><span style="background:#F4F4F4" cite="http://">0.55</span></td><td><span style="background:#F4F4F4" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.35</span></td><td><span style="background:#FF99FF" cite="http://">0.45</span></td><td><span style="background:#FF99FF" cite="http://">0.20</span></td><td><span style="background:#FF99FF" cite="http://">0.00</span></td><td><span style="background:#FF99FF" cite="http://">0.05</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.00</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#CC99CC" cite="http://">0.90</span></td><td><span style="background:#CC99CC" cite="http://">0.40</span></td><td><span style="background:#CC99CC" cite="http://">0.00</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.29</span></td><td><span style="background:#33FFCC" cite="http://">0.07</span></td><td><span style="background:#33FFCC" cite="http://">0.14</span></td><td><span style="background:#33FFCC" cite="http://">0.93</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Monomers</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://">A</span></td><td>626</td></tr><tr><td><span style="color:red" cite="http://">T</span></td><td>496</td></tr><tr><td><span style="color:red" cite="http://">G</span></td><td>248</td></tr><tr><td><span style="color:red" cite="http://">C</span></td><td>214</td></tr></table>
+<p><a href="http://search.cpan.org/~shardiwal/Bio-Tools-CodonOptTable-1.05/lib/Bio/Tools/CodonOptTable.pm">Source code</a> is available.</p>
+</p><h1>Report for Whole Genome</h1>
+<p><span style="color:red" cite="http://">Codon Adaptation Index (CAI) for sequence</span> : 0.57</p>
+<p><span style="color:red" cite="http://">GC percentage for sequence</span> : 28.86%</p>
+<p><span style="color:red" cite="http://"><span class="caps">GENETIC CODE USED</span></span> : 1 <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Utils/wprintgc.cgi"><small>more about genetic code</small></a></p>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b><span class="caps">CODON USAGE</span></b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">COUNT</span></span></td><td><span style="background:#f4f4f4" cite="http://">2000</span></td><td><span style="background:#f4f4f4" cite="http://">7080</span></td><td><span style="background:#f4f4f4" cite="http://">1187</span></td><td><span style="background:#f4f4f4" cite="http://">8110</span></td><td><span style="background:#FF99FF" cite="http://">1277</span></td><td><span style="background:#FF99FF" cite="http://">3427</span></td><td><span style="background:#FF99FF" cite="http://">913</span></td><td><span style="background:#FF99FF" cite="http://">512</span></td><td><span style="background:#FF99FF" cite="http://">11465</span></td><td><span style="background:#FF99FF" cite="http://">584</span></td><td><span style="background:#CC99CC" cite="http://">6857</span></td><td><span style="background:#CC99CC" cite="http://">25195</span></td><td><span style="background:#99FFCC" cite="http://">3762</span></td><td><span style="background:#99FFCC" cite="http://">15623</span></td><td><span style="background:#99CC99" cite="http://">2397</span></td><td><span style="background:#99CC99" cite="http://">3330</span></td><td><span style="background:#CCFF00" cite="http://">9874</span></td><td><span style="background:#CCFF00" cite="http://">2224</span></td><td><span style="background:#FF00CC" cite="http://">6834</span></td><td><span style="background:#FF00CC" cite="http://">19297</span></td><td><span style="background:#33FFCC" cite="http://">8360</span></td><td><span style="background:#33FFCC" cite="http://">5151</span></td><td><span style="background:#33FFCC" cite="http://">3452</span></td><td><span style="background:#33FFCC" cite="http://">3285</span></td><td><span style="background:#66CCFF" cite="http://">1808</span></td><td><span style="background:#66CCFF" cite="http://">4294</span></td><td><span style="background:#c9c9c9" cite="http://">23760</span></td><td><span style="background:#c9c9c9" cite="http://">4165</span></td><td><span style="background:#c9c9c9" cite="http://">17140</span></td><td><span style="background:#CCFFFF" cite="http://">11759</span></td><td><span style="background:#CCFFFF" cite="http://">1426</span></td><td><span style="background:#CCFFFF" cite="http://">17941</span></td><td><span style="background:#CCFFFF" cite="http://">4742</span></td><td><span style="background:#CCFFFF" cite="http://">1385</span></td><td><span style="background:#CCFFFF" cite="http://">8043</span></td><td><span style="background:#FFFFCC" cite="http://">11148</span></td><td><span style="background:#FFFFCC" cite="http://">37595</span></td><td><span style="background:#FFFF66" cite="http://">7794</span></td><td><span style="background:#FFCC00" cite="http://">24077</span></td><td><span style="background:#FFCC00" cite="http://">3813</span></td><td><span style="background:#F4F4F4" cite="http://">648</span></td><td><span style="background:#F4F4F4" cite="http://">1607</span></td><td><span style="background:#F4F4F4" cite="http://">3746</span></td><td><span style="background:#F4F4F4" cite="http://">4146</span></td><td><span style="background:#FF99FF" cite="http://">6834</span></td><td><span style="background:#FF99FF" cite="http://">7372</span></td><td><span style="background:#FF99FF" cite="http://">5162</span></td><td><span style="background:#FF99FF" cite="http://">1072</span></td><td><span style="background:#FF99FF" cite="http://">1834</span></td><td><span style="background:#FF99FF" cite="http://">9876</span></td><td><span style="background:#f8f8f8" cite="http://">2607</span></td><td><span style="background:#f8f8f8" cite="http://">3902</span></td><td><span style="background:#f8f8f8" cite="http://">6838</span></td><td><span style="background:#CC99CC" cite="http://">6995</span></td><td><span style="background:#CC99CC" cite="http://">8161</span></td><td><span style="background:#CC99CC" cite="http://">2444</span></td><td><span style="background:#CC99CC" cite="http://">1195</span></td><td><span style="background:#99FFCC" cite="http://">3298</span></td><td><span style="background:#CCFF00" cite="http://">15345</span></td><td><span style="background:#CCFF00" cite="http://">4760</span></td><td><span style="background:#33FFCC" cite="http://">1204</span></td><td><span style="background:#33FFCC" cite="http://">2398</span></td><td><span style="background:#33FFCC" cite="http://">11350</span></td><td><span style="background:#33FFCC" cite="http://">6016</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Relative Synonimous Codon Usage (RSCU)</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">RSCU</span></span></td><td><span style="background:#f4f4f4" cite="http://">0.44</span></td><td><span style="background:#f4f4f4" cite="http://">1.54</span></td><td><span style="background:#f4f4f4" cite="http://">0.26</span></td><td><span style="background:#f4f4f4" cite="http://">1.77</span></td><td><span style="background:#FF99FF" cite="http://">0.42</span></td><td><span style="background:#FF99FF" cite="http://">1.13</span></td><td><span style="background:#FF99FF" cite="http://">0.30</span></td><td><span style="background:#FF99FF" cite="http://">0.17</span></td><td><span style="background:#FF99FF" cite="http://">3.78</span></td><td><span style="background:#FF99FF" cite="http://">0.19</span></td><td><span style="background:#CC99CC" cite="http://">0.43</span></td><td><span style="background:#CC99CC" cite="http://">1.57</span></td><td><span style="background:#99FFCC" cite="http://">0.39</span></td><td><span style="background:#99FFCC" cite="http://">1.61</span></td><td><span style="background:#99CC99" cite="http://">0.84</span></td><td><span style="background:#99CC99" cite="http://">1.16</span></td><td><span style="background:#CCFF00" cite="http://">1.63</span></td><td><span style="background:#CCFF00" cite="http://">0.37</span></td><td><span style="background:#FF00CC" cite="http://">0.52</span></td><td><span style="background:#FF00CC" cite="http://">1.48</span></td><td><span style="background:#33FFCC" cite="http://">1.65</span></td><td><span style="background:#33FFCC" cite="http://">1.02</span></td><td><span style="background:#33FFCC" cite="http://">0.68</span></td><td><span style="background:#33FFCC" cite="http://">0.65</span></td><td><span style="background:#66CCFF" cite="http://">0.59</span></td><td><span style="background:#66CCFF" cite="http://">1.41</span></td><td><span style="background:#c9c9c9" cite="http://">1.58</span></td><td><span style="background:#c9c9c9" cite="http://">0.28</span></td><td><span style="background:#c9c9c9" cite="http://">1.14</span></td><td><span style="background:#CCFFFF" cite="http://">1.56</span></td><td><span style="background:#CCFFFF" cite="http://">0.19</span></td><td><span style="background:#CCFFFF" cite="http://">2.38</span></td><td><span style="background:#CCFFFF" cite="http://">0.63</span></td><td><span style="background:#CCFFFF" cite="http://">0.18</span></td><td><span style="background:#CCFFFF" cite="http://">1.07</span></td><td><span style="background:#FFFFCC" cite="http://">0.46</span></td><td><span style="background:#FFFFCC" cite="http://">1.54</span></td><td><span style="background:#FFFF66" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">1.73</span></td><td><span style="background:#FFCC00" cite="http://">0.27</span></td><td><span style="background:#F4F4F4" cite="http://">0.26</span></td><td><span style="background:#F4F4F4" cite="http://">0.63</span></td><td><span style="background:#F4F4F4" cite="http://">1.48</span></td><td><span style="background:#F4F4F4" cite="http://">1.63</span></td><td><span style="background:#FF99FF" cite="http://">1.28</span></td><td><span style="background:#FF99FF" cite="http://">1.38</span></td><td><span style="background:#FF99FF" cite="http://">0.96</span></td><td><span style="background:#FF99FF" cite="http://">0.20</span></td><td><span style="background:#FF99FF" cite="http://">0.34</span></td><td><span style="background:#FF99FF" cite="http://">1.84</span></td><td><span style="background:#f8f8f8" cite="http://">0.59</span></td><td><span style="background:#f8f8f8" cite="http://">0.88</span></td><td><span style="background:#f8f8f8" cite="http://">1.54</span></td><td><span style="background:#CC99CC" cite="http://">1.49</span></td><td><span style="background:#CC99CC" cite="http://">1.74</span></td><td><span style="background:#CC99CC" cite="http://">0.52</span></td><td><span style="background:#CC99CC" cite="http://">0.25</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">1.53</span></td><td><span style="background:#CCFF00" cite="http://">0.47</span></td><td><span style="background:#33FFCC" cite="http://">0.23</span></td><td><span style="background:#33FFCC" cite="http://">0.46</span></td><td><span style="background:#33FFCC" cite="http://">2.17</span></td><td><span style="background:#33FFCC" cite="http://">1.15</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Relative Adaptiveness of Codon</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://"><span class="caps">CODON</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCC</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCA</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCG</span></span></td><td><span style="background:#f4f4f4" cite="http://"><span class="caps">GCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">CGC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">AAT</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAC</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">GAT</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGC</span></span></td><td><span style="background:#99CC99" cite="http://"><span class="caps">TGT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAA</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">CAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAG</span></span></td><td><span style="background:#FF00CC" cite="http://"><span class="caps">GAA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGA</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GGC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAC</span></span></td><td><span style="background:#66CCFF" cite="http://"><span class="caps">CAT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATT</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATC</span></span></td><td><span style="background:#c9c9c9" cite="http://"><span class="caps">ATA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTT</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTG</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTA</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">CTC</span></span></td><td><span style="background:#CCFFFF" cite="http://"><span class="caps">TTG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAG</span></span></td><td><span style="background:#FFFFCC" cite="http://"><span class="caps">AAA</span></span></td><td><span style="background:#FFFF66" cite="http://"><span class="caps">ATG</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTT</span></span></td><td><span style="background:#FFCC00" cite="http://"><span class="caps">TTC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCG</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCC</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCA</span></span></td><td><span style="background:#F4F4F4" cite="http://"><span class="caps">CCT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGT</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCA</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">AGC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCG</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCC</span></span></td><td><span style="background:#FF99FF" cite="http://"><span class="caps">TCT</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAG</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TGA</span></span></td><td><span style="background:#f8f8f8" cite="http://"><span class="caps">TAA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACT</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACA</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACC</span></span></td><td><span style="background:#CC99CC" cite="http://"><span class="caps">ACG</span></span></td><td><span style="background:#99FFCC" cite="http://"><span class="caps">TGG</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAT</span></span></td><td><span style="background:#CCFF00" cite="http://"><span class="caps">TAC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTC</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTG</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTT</span></span></td><td><span style="background:#33FFCC" cite="http://"><span class="caps">GTA</span></span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">AMINOACID</span></span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#f4f4f4" cite="http://">Ala</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#FF99FF" cite="http://">Arg</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#CC99CC" cite="http://">Asn</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99FFCC" cite="http://">Asp</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#99CC99" cite="http://">Cys</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#CCFF00" cite="http://">Gln</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#FF00CC" cite="http://">Glu</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#33FFCC" cite="http://">Gly</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#66CCFF" cite="http://">His</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#c9c9c9" cite="http://">Ile</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#CCFFFF" cite="http://">Leu</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFFCC" cite="http://">Lys</span></td><td><span style="background:#FFFF66" cite="http://">Met</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#FFCC00" cite="http://">Phe</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#F4F4F4" cite="http://">Pro</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#FF99FF" cite="http://">Ser</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#f8f8f8" cite="http://">Stop</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#CC99CC" cite="http://">Thr</span></td><td><span style="background:#99FFCC" cite="http://">Trp</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#CCFF00" cite="http://">Tyr</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td><td><span style="background:#33FFCC" cite="http://">Val</span></td></tr><tr><td><span style="color:red" cite="http://"><span class="caps">RAC</span></span></td><td><span style="background:#f4f4f4" cite="http://">0.25</span></td><td><span style="background:#f4f4f4" cite="http://">0.87</span></td><td><span style="background:#f4f4f4" cite="http://">0.15</span></td><td><span style="background:#f4f4f4" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.11</span></td><td><span style="background:#FF99FF" cite="http://">0.30</span></td><td><span style="background:#FF99FF" cite="http://">0.08</span></td><td><span style="background:#FF99FF" cite="http://">0.04</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.05</span></td><td><span style="background:#CC99CC" cite="http://">0.27</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#99FFCC" cite="http://">0.24</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#99CC99" cite="http://">0.72</span></td><td><span style="background:#99CC99" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.23</span></td><td><span style="background:#FF00CC" cite="http://">0.35</span></td><td><span style="background:#FF00CC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.62</span></td><td><span style="background:#33FFCC" cite="http://">0.41</span></td><td><span style="background:#33FFCC" cite="http://">0.39</span></td><td><span style="background:#66CCFF" cite="http://">0.42</span></td><td><span style="background:#66CCFF" cite="http://">1.00</span></td><td><span style="background:#c9c9c9" cite="http://">1.00</span></td><td><span style="background:#c9c9c9" cite="http://">0.18</span></td><td><span style="background:#c9c9c9" cite="http://">0.72</span></td><td><span style="background:#CCFFFF" cite="http://">0.66</span></td><td><span style="background:#CCFFFF" cite="http://">0.08</span></td><td><span style="background:#CCFFFF" cite="http://">1.00</span></td><td><span style="background:#CCFFFF" cite="http://">0.26</span></td><td><span style="background:#CCFFFF" cite="http://">0.08</span></td><td><span style="background:#CCFFFF" cite="http://">0.45</span></td><td><span style="background:#FFFFCC" cite="http://">0.30</span></td><td><span style="background:#FFFFCC" cite="http://">1.00</span></td><td><span style="background:#FFFF66" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">1.00</span></td><td><span style="background:#FFCC00" cite="http://">0.16</span></td><td><span style="background:#F4F4F4" cite="http://">0.16</span></td><td><span style="background:#F4F4F4" cite="http://">0.39</span></td><td><span style="background:#F4F4F4" cite="http://">0.90</span></td><td><span style="background:#F4F4F4" cite="http://">1.00</span></td><td><span style="background:#FF99FF" cite="http://">0.69</span></td><td><span style="background:#FF99FF" cite="http://">0.75</span></td><td><span style="background:#FF99FF" cite="http://">0.52</span></td><td><span style="background:#FF99FF" cite="http://">0.11</span></td><td><span style="background:#FF99FF" cite="http://">0.19</span></td><td><span style="background:#FF99FF" cite="http://">1.00</span></td><td><span style="background:#f8f8f8" cite="http://">0.38</span></td><td><span style="background:#f8f8f8" cite="http://">0.57</span></td><td><span style="background:#f8f8f8" cite="http://">1.00</span></td><td><span style="background:#CC99CC" cite="http://">0.86</span></td><td><span style="background:#CC99CC" cite="http://">1.00</span></td><td><span style="background:#CC99CC" cite="http://">0.30</span></td><td><span style="background:#CC99CC" cite="http://">0.15</span></td><td><span style="background:#99FFCC" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">1.00</span></td><td><span style="background:#CCFF00" cite="http://">0.31</span></td><td><span style="background:#33FFCC" cite="http://">0.11</span></td><td><span style="background:#33FFCC" cite="http://">0.21</span></td><td><span style="background:#33FFCC" cite="http://">1.00</span></td><td><span style="background:#33FFCC" cite="http://">0.53</span></td></tr></table>
+<p><span style="background:#336699;color:white;padding:5px" cite="http://"><big><b>Monomers</b></big></span></p>
+<table><tr><td><span style="color:red" cite="http://">A</span></td><td>524241</td></tr><tr><td><span style="color:red" cite="http://">T</span></td><td>440303</td></tr><tr><td><span style="color:red" cite="http://">G</span></td><td>225741</td></tr><tr><td><span style="color:red" cite="http://">C</span></td><td>165502</td></tr></table>
+<p><a href="http://search.cpan.org/~shardiwal/Bio-Tools-CodonOptTable-1.05/lib/Bio/Tools/CodonOptTable.pm">Source code</a> is available.</p>
+==Charts==
+{| class="wikitable"
+| BBA15 ||  [[file:hist 1.png| 600px]]
+|-
+| BBA24 ||  [[file:hist 2.png| 600px]]
+|-
+| BBA68 ||  [[file:hist 3.png| 600px]]
+|-
+| BBB 18||  [[file:hist 1.png| 600px]]
+|-
+| Whole genome || [[file:hist 5.png| 600px]]
+|}
 ==Hypothesis & Background==
 * Central Hypothesis: Borrelia host-interacting genes show optimal codon usage
 * Background/Rationale:
-** Borrelia is an obligate, non-free-living parasite of vertebrates. A large number of genes are devoted to host invasion and to survival the host immune defense.
+** Borrelia is an obligate, non-free-living parasite of vertebrates. A large number of genes are devoted to host invasion and to surviving the host immune defense.
 ** Evolutionary theory predicts that highly expressed genes use the most abundant tRNA in the cell, and, as a result, they tend to show strong codon usage biases
 ** We expect Borrelia host-interacting, virulence-conferring genes use more optimal codons than housekeeping genes

Borrelia codon usage: Difference between revisions

Latest revision as of 21:08, 31 July 2013

Contents

Data

Report for BBA15

Report for BBA24

Report for BBA68

Report for BBB18

Report for Whole Genome

Charts

Hypothesis & Background

Data & Overview

Essential Computing skills

Essential Readings

Navigation menu

Borrelia codon usage: Difference between revisions

Latest revision as of 21:08, 31 July 2013

Data

Report for BBA15

Report for BBA24

Report for BBA68

Report for BBB18

Report for Whole Genome

Charts

Hypothesis & Background

Data & Overview

Essential Computing skills

Essential Readings

Navigation menu

Search