Summer 2021: Difference between revisions
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imported>Weigang (Created page with "==Project 1. HIV compartmentalized evolution== * Participants * Reading list ** HIV compartmentalized evolution: [https://retrovirology.biomedcentral.com/articles/10.1186/s129...") |
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** Strodthoff et al (2020). Bioinformatics. [https://academic.oup.com/bioinformatics/article/36/8/2401/5698270 UDSMProt: universal deep sequence models for protein classification]. [https://github.com/nstrodt/UDSMProt Source code on Github] | ** Strodthoff et al (2020). Bioinformatics. [https://academic.oup.com/bioinformatics/article/36/8/2401/5698270 UDSMProt: universal deep sequence models for protein classification]. [https://github.com/nstrodt/UDSMProt Source code on Github] | ||
** [https://www.pnas.org/content/118/15/e2016239118 Rives et al (2021). Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequences. | ** [https://www.pnas.org/content/118/15/e2016239118 Rives et al (2021). PNAS. Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequences.] [https://github.com/facebookresearch/esm Github repository] | ||
Revision as of 02:58, 2 June 2021
Project 1. HIV compartmentalized evolution
- Participants
- Reading list
- HIV compartmentalized evolution: Evering et al (2014)
Project 2. Natural Language models of proteins
- Participants
- Reading list