NY-RaMP Mentoring: Difference between revisions
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=Cohort 1, August 2024 - June 2025= | =Cohort 1, August 2024 - June 2025= | ||
==Readings and Practices== | |||
* R/Rstudio Workshops | |||
* Computing Skills for Biologists | |||
* Akther et al (2024) | |||
* Phylogenetics for the faint of heart | |||
==Project 1. MDM2 proteomics (Collaboration with Bargonetti lab)== | |||
# Data visualization | |||
# Gene clustering | |||
# Pathway enrichment analysis | |||
# Shiny App | |||
==Project 2. Borrelia vlsE database== | |||
# Data extraction | |||
# Gene trees | |||
# vls Database | |||
==Project 3. Borrelia pan-genomics== | |||
# Data extraction | |||
# Pan-genome database | |||
Latest revision as of 03:41, 8 September 2024
Cohort 1, August 2024 - June 2025
Readings and Practices
- R/Rstudio Workshops
- Computing Skills for Biologists
- Akther et al (2024)
- Phylogenetics for the faint of heart
Project 1. MDM2 proteomics (Collaboration with Bargonetti lab)
- Data visualization
- Gene clustering
- Pathway enrichment analysis
- Shiny App
Project 2. Borrelia vlsE database
- Data extraction
- Gene trees
- vls Database
Project 3. Borrelia pan-genomics
- Data extraction
- Pan-genome database