Hackathon 2020: Difference between revisions
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# Zhou et al (2018): https://www.ncbi.nlm.nih.gov/pubmed/32015507 | # Zhou et al (2018): https://www.ncbi.nlm.nih.gov/pubmed/32015507 | ||
# ncoV website from nextstrain: https://nextstrain.org/ncov | |||
=Preps= | =Preps= | ||
Revision as of 18:45, 8 February 2020
Teams
- Genome collection: Edgar, Brian
- Genbank file parsing: Edgar, Lia
- Manual input of geographic origin and dates: Bing, Desiree, Jerry, Ramen
- Database and database tools: Saymon and Lia
- Genome website development: Edgar & Lia
- Epidemiology model & app development: Brian, Chris, Junho
Links
- Zhou et al (2018): https://www.ncbi.nlm.nih.gov/pubmed/32015507
- ncoV website from nextstrain: https://nextstrain.org/ncov
Preps
- Jan 30: Hackathon announced
- Feb 6
- Genome sequences downloaded and parsed (Edgar)
- Database design and population (Lia)