Hackathon 2020

Qiu Lab 2nd Hackathon on 2019-2020 Coronavirus Outbreak
Date & time: Saturday, Feb 8, 2020
Location: Belfer Research Building Room 422

Photos

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  Jan 31, 2014, Participants: Daniel, Girish, Pedro, Rayees, Raymond, Regina, Saymon, Weigang

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  Collecting ticks

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  A host-seeking female adult Lyme tick (Ixodes scapularis)

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  The same tick moving

Teams

• Genome collection: Edgar, Brian
• Genbank file parsing: Edgar, Lia
• Manual input of geographic origin and dates: Bing, Desiree, Jerry, Ramen
• Database and database tools: Saymon and Lia
• Genome website development: Edgar & Lia
• Epidemiology model & app development: Brian, Chris, Junho

Links

1. Zhou et al (2018): https://www.ncbi.nlm.nih.gov/pubmed/32015507
2. ncoV website from nextstrain: https://nextstrain.org/ncov

Preps

• Jan 30: Hackathon announced
• Feb 6
  • Genome sequences downloaded and parsed (Edgar)
  • Database design and population (Lia)