Hackathon 2020: Difference between revisions
Jump to navigation
Jump to search
imported>Weigang m (→Photos) |
imported>Weigang m (→Photos) |
||
| Line 5: | Line 5: | ||
</center> | </center> | ||
=Photos= | =Photos= | ||
<gallery mode= | <gallery mode=slideshow heights=200px> | ||
Image: Hackathon-1.jpg|Team annotation | Image: Hackathon-1.jpg|Team annotation | ||
Image:Hackathon-2.jpg|Team Shiny App | Image:Hackathon-2.jpg|Team Shiny App | ||
Revision as of 19:33, 8 February 2020
Qiu Lab 2nd Hackathon on 2019-2020 Coronavirus Outbreak
Date & time: Saturday, Feb 8, 2020
Location: Belfer Research Building Room 422
Photos
Team annotation
Team Shiny App
Team Database/Genome Website
Morning group shot
Teams
- Genome collection: Edgar, Brian
- Genbank file parsing: Edgar, Lia
- Manual input of geographic origin and dates: Bing, Desiree, Jerry, Ramen
- Database and database tools: Saymon and Lia
- Genome website development: Edgar & Lia
- Epidemiology model & app development: Brian, Chris, Junho
Links
- Zhou et al (2018): https://www.ncbi.nlm.nih.gov/pubmed/32015507
- ncoV website from nextstrain: https://nextstrain.org/ncov
Preps
- Jan 30: Hackathon announced
- Feb 6
- Genome sequences downloaded and parsed (Edgar)
- Database design and population (Lia)