Hackathon 2020: Difference between revisions
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<center> | |||
Qiu Lab 2nd Hackathon on 2019-2020 Coronavirus Outbreak<br> | |||
Date & time: Saturday, Feb 8, 2020<br> | |||
Location: Belfer Research Building Room 422 | |||
</center> | |||
=Photos= | |||
<gallery> | |||
Image: Hackaton.png|Jan 31, 2014, Participants: Daniel, Girish, Pedro, Rayees, Raymond, Regina, Saymon, Weigang | |||
Image:Tick-hunting-2010-07-212.jpg|Collecting ticks | |||
Image:tick2-small.jpg|A host-seeking female adult Lyme tick (''Ixodes scapularis'') | |||
Image:tick1-small.jpg|The same tick moving | |||
</gallery> | |||
=Teams= | =Teams= | ||
* Genome collection: Edgar, Brian | * Genome collection: Edgar, Brian | ||
Revision as of 18:51, 8 February 2020
Qiu Lab 2nd Hackathon on 2019-2020 Coronavirus Outbreak
Date & time: Saturday, Feb 8, 2020
Location: Belfer Research Building Room 422
Photos
Jan 31, 2014, Participants: Daniel, Girish, Pedro, Rayees, Raymond, Regina, Saymon, Weigang
Collecting ticks
A host-seeking female adult Lyme tick (Ixodes scapularis)
The same tick moving
Teams
- Genome collection: Edgar, Brian
- Genbank file parsing: Edgar, Lia
- Manual input of geographic origin and dates: Bing, Desiree, Jerry, Ramen
- Database and database tools: Saymon and Lia
- Genome website development: Edgar & Lia
- Epidemiology model & app development: Brian, Chris, Junho
Links
- Zhou et al (2018): https://www.ncbi.nlm.nih.gov/pubmed/32015507
- ncoV website from nextstrain: https://nextstrain.org/ncov
Preps
- Jan 30: Hackathon announced
- Feb 6
- Genome sequences downloaded and parsed (Edgar)
- Database design and population (Lia)