Hackathon 2020: Difference between revisions

From QiuLab
Jump to navigation Jump to search
imported>Weigang
imported>Weigang
Line 1: Line 1:
=Participants=
=Teams=
* Team 1 (Saymon, Raman). Sequences, Alignments, and phylogeny
* Genome collection: Edgar, Brian
* Team 2 (Edgar, Lia). Web development
* Genbank file parsing: Edgar, Lia
* Team 3 (Brian, Chris). Epidemiology Shiny App
* Manual input of geographic origin and dates: Bing, Desiree, Jerry, Ramen
* Database and database tools: Saymon and Lia
* Genome website development: Edgar & Lia
* Epidemiology model & app development: Brian, Chris, Junho
 
=Links=
=Links=
# Zhou et al (2018): https://www.ncbi.nlm.nih.gov/pubmed/32015507
# Zhou et al (2018): https://www.ncbi.nlm.nih.gov/pubmed/32015507

Revision as of 18:44, 8 February 2020

Teams

  • Genome collection: Edgar, Brian
  • Genbank file parsing: Edgar, Lia
  • Manual input of geographic origin and dates: Bing, Desiree, Jerry, Ramen
  • Database and database tools: Saymon and Lia
  • Genome website development: Edgar & Lia
  • Epidemiology model & app development: Brian, Chris, Junho

Links

  1. Zhou et al (2018): https://www.ncbi.nlm.nih.gov/pubmed/32015507

Preps

  • Jan 30: Hackathon announced
  • Feb 6
    • Genome sequences downloaded and parsed (Edgar)
    • Database design and population (Lia)