Undergrad Research Experience

Fall 2020

Participants

• 'Eamen Ho': Volunteer research assistant
• 'Ramandeep Singh': BIOL 48002
• 'Desiree Pante': BIOL 48001
• 'Afsana Rahman': Volunteer research assistant
• 'Roman Shimonov': BIOL 48002
• 'Justin Hiraldo': BIOL 48002
• 'Zaheen Hossain': Volunteer research assistant

Schedule

• Monday at 12 noon - 2pm by Zoom

Project 1. Structure & evolution of multipartite genome of Lyme disease bacteria

• Participants: Desiree & Ramon
• Readings
  • Review: deCenzo & Finan (2017).
• Data set

Project 2. OspC Cross-reactivity analysis

• Participants: Justin, Roman
• Readings: Ivanova et al (2009)
• Tool: ImageJ
• Data set (to be sent)

Project 3. Clostridium transcriptome analysis

• Participants: Eaman, Zaheen
• Readings
  • SPARTA pipeline
  • Fletcher et al (2018).
  • Gu et al (2018)
• Data set